STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91475.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (120 aa)    
Predicted Functional Partners:
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.699
SCA92395.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.641
SCA91944.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.604
cysS
Cysteine--tRNA ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.587
mrnC
Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
       0.587
pvaA
Lysozyme-like protein; Function of strongly homologous gene; enzyme.
  
     0.577
SCA91184.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.563
SCA91731.1
Conserved hypothetical protein with Methicillin resistance domain; Homologs of previously reported genes of unknown function.
  
     0.539
SCA92629.1
Putative Adenine-specific methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.518
ybbR
Conserved hypothetical protein, YbbR-like domain-containing; Homologs of previously reported genes of unknown function.
  
     0.509
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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