STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macBABC transporter ATP-binding and permease protein; Function of strongly homologous gene; transporter. (664 aa)    
Predicted Functional Partners:
SCA91210.1
Putative ABC transporter, ATP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
0.704
SCA91693.1
Putative ABC transporter ATP-binding protein, (antimicrobial peptide transport system domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
0.685
hrtA
Putative hemin import ATP-binding protein HrtA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
0.683
SCA92982.1
Putative Macrolide export ATP-binding/permease protein MacB type bacteriocin ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
0.682
bceA
Bacitracin export ATP-binding protein BceA; Function of strongly homologous gene; transporter.
 
 
0.680
SCA92054.1
ABC transporter; Function of strongly homologous gene; transporter.
 
 
0.677
hrtB
Permease family protein (ABC transporter permease protein); Function of strongly homologous gene; transporter.
  
 
 0.671
bceB
Putative ABC transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.659
pdxU
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.559
SCA91983.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.540
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.