STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgiDIIMModification methylase HgiDII; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (350 aa)    
Predicted Functional Partners:
SCA91636.1
Putative Molecular chaperone, HSP90 family (68.4 kDa protein in HgiDIIM 3'region); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.950
SCA91637.1
Conserved hypothetical protein (containing a Transposase IS30-like HTH domain); Homologs of previously reported genes of unknown function.
       0.543
SCA91634.1
Conserved hypothetical protein, (NAD(FAD)-utilizing dehydrogenase, sll0175 homolog domain); Homologs of previously reported genes of unknown function.
       0.508
accA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
 
   
 0.415
SCA91638.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.404
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.