STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
melBPutative Sugar (Glycoside-Pentoside-Hexuronide) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (454 aa)    
Predicted Functional Partners:
pgmB
Beta-phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.774
SCA91720.1
Putative beta-glucosidase / GH3, similar to LACPI-0928 from L. piscium MKFS47; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
   
 0.769
xynB
Xylan 1,4-beta-xylosidase XynB; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.568
cbgA
Beta-galactosidase / GH2, similar to LACPI-0215 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.510
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.495
adh2
Aldehyde-alcohol dehydrogenase 2 (Includes: Alcohol dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.476
fruA
D-tagatose-1,6-bisphosphate aldolase subunit GatY; Function of homologous gene experimentally demonstrated in an other organism; transporter;fragment of phosphotransferase system, fructose-specific IIBC component (part 2).
     
 0.425
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
  
 0.410
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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