STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsKDNA translocase FtsK; Function of homologous gene experimentally demonstrated in an other organism; cell process. (778 aa)    
Predicted Functional Partners:
holA
Putative DNA polymerase III delta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.782
spo0J
Stage 0 sporulation protein J; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ParB family.
  
  
 0.759
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.723
esxA
Conserved hypothetical protein, virulence factor Type VII secretion system ESAT-6-like domain; Homologs of previously reported genes of unknown function; Belongs to the WXG100 family.
  
 
 0.624
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
  
 0.604
SCA92472.1
Conserved hypothetical protein (putative cell wall protein); Homologs of previously reported genes of unknown function; Belongs to the peptidase S1B family.
   
 
 0.604
rpoC
RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
   
 0.564
divIB
Cell division protein DivIB; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
   
 
 0.553
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
   
 0.548
ftsW
Lipid II flippase FtsW; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the SEDS family.
 
  
 0.545
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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