STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA91810.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (285 aa)    
Predicted Functional Partners:
SCA91809.1
Conserved hypothetical protein, (Transcriptional regulator, PadR family containing domain); Homologs of previously reported genes of unknown function.
 
  
 0.869
SCA91819.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
   
 0.582
LP2241_50366
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin;putative transposase fragment.
  
     0.517
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
       0.461
padR2
Conserved protein if unknown function containing PadR family transcriptional regulator domain; Homologs of previously reported genes of unknown function.
 
  
 0.457
SCA91580.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.448
SCA92176.1
Conserved membrane hypothetical protein (containing a Major facilitator superfamily domain); Homologs of previously reported genes of unknown function.
  
     0.426
mccF
Putative carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.425
SCA92500.1
Putative cation efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
     0.408
SCA90928.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.407
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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