STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adcAZinc-binding lipoprotein AdcA; Function of strongly homologous gene; lipoprotein; Belongs to the bacterial solute-binding protein 9 family. (504 aa)    
Predicted Functional Partners:
adcC
Zinc transport system ATP-binding protein AdcC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.999
adcB
Zinc transport system permease protein AdcB; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.999
mntB
Manganese transport system ATP-binding protein MntB; Function of strongly homologous gene; transporter.
 
  
 0.996
mntC
Manganese transport system membrane protein MntC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.996
adcR
Transcriptional repressor AdcR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 0.918
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
  
  
 0.776
purL
Phosphoribosylformylglycinamidine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.733
rpmE
50S ribosomal protein L31 type B; Function of homologous gene experimentally demonstrated in an other organism; factor.
  
  
 0.686
fimA
Manganese ABC transporter substrate-binding lipoprotein, surface adhesin; Function of homologous gene experimentally demonstrated in an other organism; lipoprotein; Belongs to the bacterial solute-binding protein 9 family.
 
  
0.563
rpmB
50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.545
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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