STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bceABacitracin export ATP-binding protein BceA; Function of strongly homologous gene; transporter. (250 aa)    
Predicted Functional Partners:
bceB
Putative ABC transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.988
bseS
Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.898
oppD
Oligopeptide transporter subunit; Function of strongly homologous gene; transporter.
 
     
0.872
oppD-2
Oligopeptide ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 
     
0.857
bseR
Putative signal transduction response regulator, C-terminal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
   
 0.847
SCA91897.1
ABC transporter, ATP-binding protein; Function of strongly homologous gene; transporter.
 
  
 0.717
macB
ABC transporter ATP-binding and permease protein; Function of strongly homologous gene; transporter.
 
 
0.680
hrtB
Permease family protein (ABC transporter permease protein); Function of strongly homologous gene; transporter.
  
 
 0.659
SCA92794.1
ABC transporter, ATPase activity; Function of strongly homologous gene; transporter.
     
0.567
SCA93015.1
Putative ABC transporter, ATP-binding transport protein NatA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.544
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.