STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92013.1Putative D-ribose-binding periplasmic protein RbsB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (343 aa)    
Predicted Functional Partners:
SCA92014.1
Putative ribose transport system permease protein RbsC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.990
rbsA
Ribose import ATP-binding protein RbsA; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.961
araG
L-arabinose transport ATP-binding protein AraG; Function of strongly homologous gene; transporter.
 
 
 0.933
SCA92056.1
Conserved hypothetical protein (contaning a signal transduction histidine kinase); Homologs of previously reported genes of unknown function.
  
 
 0.928
xylH
Sugar ABC transporter; Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.826
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.785
sbpA
Multiple sugar-binding protein SbpA; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
  
 0.779
yesO
Putative Sugar transport system sugar-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.613
phoR
Putative Phosphate regulon sensor protein PhoR (SphS) (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 
 0.590
maeK
Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 
 0.590
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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