STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglH-3Aryl-phospho-beta-D-glucosidase BglH / GH1; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (489 aa)    
Predicted Functional Partners:
bglF
PTS system, beta-glucoside-specific IIABC subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.774
licT-2
Transcription antiterminator(PTS operon regulator); Function of strongly homologous gene; regulator.
  
  
 0.742
bglF-2
PTS system, beta-glucoside-specific IIABC subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.606
fruK
1-phosphofructokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.471
SCA91304.1
Putative Phosphotransferase system cellobiose-specific component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 0.464
ptcC
Phosphotransferase system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
  
  
 0.464
apbE2
Putative thiamine biosynthesis lipoprotein (ApbE); Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
       0.450
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
       0.450
srtA
Sortase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.437
bglF-3
PTS system, beta-glucoside-specific IIABC component; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.408
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.