STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hrtAPutative hemin import ATP-binding protein HrtA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (224 aa)    
Predicted Functional Partners:
hrtB
Permease family protein (ABC transporter permease protein); Function of strongly homologous gene; transporter.
 
 
 0.978
macB
ABC transporter ATP-binding and permease protein; Function of strongly homologous gene; transporter.
 
 
0.683
bceB
Putative ABC transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.659
SCA93015.1
Putative ABC transporter, ATP-binding transport protein NatA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.640
SCA90946.1
Putative ABC transporter ATP binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
 0.600
oppC1
Oligopeptide transport system permease protein AppC or OppC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
    0.532
SCA92272.1
Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.518
ciaH
Two-component sensor histidine kinase CiaH; Function of homologous gene experimentally demonstrated in an other organism; regulator.
  
  
 0.439
pheS
Phenylalanine tRNA synthetase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
 
 
 0.430
trxB
Thioredoxin reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.427
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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