STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92395.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (863 aa)    
Predicted Functional Partners:
SCA91184.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.739
gtrB1
Glycosyl transferase, family 2 / GT2, similar to LACPI-0279 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.705
pvaA
Lysozyme-like protein; Function of strongly homologous gene; enzyme.
  
     0.705
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.660
SCA91475.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.641
mreD
Conserved hypothetical protein containing Rod shape-determining protein MreD domain; Homologs of previously reported genes of unknown function.
  
    0.622
SCA91467.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.614
SCA91182.1
Hypothetical protein; No homology to any previously reported sequences.
      
 0.592
SCA92605.1
Conserved membrane hypothetical protein, GtcA family; Homologs of previously reported genes of unknown function.
 
  
 0.585
xerD
Tyrosine recombinase XerD-like; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family.
  
     0.572
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.