STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92418.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (134 aa)    
Predicted Functional Partners:
mccF
Putative carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.657
exoA
Exodeoxyribonuclease; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.631
SCA92420.1
Hypothetical protein; No homology to any previously reported sequences.
       0.631
LP2241_10144
Cell surface protein, DUF285-containing; Homologs of previously reported genes of unknown function;Fragment of conserved hypothetical protein containing LXPTG internalin j domain.
  
     0.609
SCA92338.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.602
phr
Deoxyribodipyrimidine photo-lyase, FAD-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DNA photolyase family.
  
  
 0.595
SCA91237.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.504
SCA91220.1
Conserved exported hypothetical protein (containing a Bacterial surface protein 26-residue repeat); Homologs of previously reported genes of unknown function.
  
     0.488
metG
Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
       0.486
SCA91221.1
DUF208-containing protein; Homologs of previously reported genes of unknown function.
  
     0.478
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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