STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92453.1Putative PTS system, IIC component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (458 aa)    
Predicted Functional Partners:
licA-2
Phosphotransferase PTS system cellobiose lichenan-specific IIA subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.884
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.878
licA-3
Phosphotransferase system, lactose/cellobiose-specific IIA subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
 0.878
SCA92454.1
Putative Beta-glucoside kinase (bglK); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.856
lacE-2
PTS system cellobiose-specific component IIB; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.846
bglC
Beta-glucosidase, Phospho-beta-D-glucosidase BglC / GH1; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.837
SCA92452.1
Homologs of previously reported genes of unknown function.
 
  
 0.792
licH
6-phospho-beta-glucosidase / GH4, similar to LACPI-1236 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.639
SCA91668.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.584
SCA92373.1
Conserved hypothetical protein (containing a DNA binding HTH domain, AraC-type domain); Homologs of previously reported genes of unknown function.
   
  
 0.566
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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