STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaB-2Putative Helicase loader DnaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (394 aa)    
Predicted Functional Partners:
dnaI
Helicase loader DnaI; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
  
 0.896
nrdR
Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
  
  
 0.791
xerD
Tyrosine recombinase XerD-like; Function of strongly homologous gene; enzyme; Belongs to the 'phage' integrase family.
  
     0.722
holB
Putative DNA polymerase III delta prime subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.708
SCA91946.1
Conserved hypothetical protein, (TPR-repeat-containing protein); Homologs of previously reported genes of unknown function.
  
     0.674
SCA92629.1
Putative Adenine-specific methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.663
SecE
Preprotein translocase SecE subunit; Function of strongly homologous gene; transporter; Belongs to the SecE/SEC61-gamma family.
  
     0.645
SCA91184.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.642
SCA91847.1
Conserved hypothetical protein, (Chromosome replication initiation protein domain); Homologs of previously reported genes of unknown function.
  
   
 0.629
SCA91493.1
Putative ATP-dependent helicase DinG/DNA polymerase III, epsilon subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.616
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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