STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92462.1Phosphotransferase enzyme family protein; Homologs of previously reported genes of unknown function. (266 aa)    
Predicted Functional Partners:
SCA91364.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.649
SCA92463.1
Conserved hypothetical protein (possibility a veg protein); Homologs of previously reported genes of unknown function.
       0.644
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.615
mecA
Putative adapter protein(MecA); Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis; Belongs to the MecA family.
  
     0.566
nrdR
Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
       0.539
dnaI
Helicase loader DnaI; Function of homologous gene experimentally demonstrated in an other organism; factor.
 
     0.512
yjjG
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0374 family.
 
     0.509
dnaB-2
Putative Helicase loader DnaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.507
SCA92579.1
Putative methyl-accepting chemotaxis-like protein; Homologs of previously reported genes of unknown function.
 
     0.498
SCA91068.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.486
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.