STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92512.1Putative Transcriptional regulator (containing a Sugar isomerase (SIS)); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (245 aa)    
Predicted Functional Partners:
SCA92047.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.691
tsaD
tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.615
rimI
Ribosomal-protein-S18p-alanineacetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.615
SCA92516.1
Putative tRNA threonylcarbamoyladenosine biosynthesis protein TsaB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
 0.552
SCA92515.1
Putative Ribosomal-protein-S18p-alanineacetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.536
SCA91304.1
Putative Phosphotransferase system cellobiose-specific component IIC; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.472
lplB2
Putative ABC superfamily ATP binding cassette transporter, membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.471
bglA-3
6-phospho-beta-glucosidase A / GH1; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.470
lplC2
Putative ABC transporter permease protein (LplC); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
     
 0.450
ptcC
Phosphotransferase system, lactose/cellobiose family IIC subunit; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
   
 0.423
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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