STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92525.1Protein SprT-like; Function of strongly homologous gene; enzyme; Belongs to the SprT family. (151 aa)    
Predicted Functional Partners:
SCA92526.1
Transcriptional accessory protein, S1 RNA-binding domain (yhgF, tex); Function of strongly homologous gene; factor.
  
  
 0.828
SCA92524.1
Putative DNA-entry nuclease (Competence-specific nuclease); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
SCA92956.1
Putative exported degradative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.632
ybiC
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.614
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Adenosine deaminase; Function of strongly homologous gene; enzyme; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.
       0.586
ecsB
Putative bacterial ABC exoprotein transporter, permease protein EcsB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.571
SCA91421.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0398 family.
  
     0.566
yabA
DNA replication intiation control protein (DnaH); Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.545
ltaS
Lipoteichoic acid synthase 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.497
yejI
Putative exported Lipase/Acylhydrolase with GDSL-like motif; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.479
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.