STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gmuD6-phospho-beta-glucosidase GmuD; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 1 family. (473 aa)    
Predicted Functional Partners:
gmuC
Oligo-beta-mannoside permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.
 
 0.919
glcK
Glucokinase (glucose kinase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.908
apu
Putative Amylopullulanase (Includes: Alpha-amylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.905
pgi
Glucose-6-phosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GPI family.
     
 0.903
pgcA
Phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.900
ptcB
Cellobiose/lichenan-specific phosphotransferase enzyme IIB component PtcB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme;putative phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (fragment 1).
  
 
 0.770
lacE-2
PTS system cellobiose-specific component IIB; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.769
licA
Phosphotransferase system (PTS) lichenan-specific enzyme IIA component; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.758
licA-2
Phosphotransferase PTS system cellobiose lichenan-specific IIA subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.758
licA-3
Phosphotransferase system, lactose/cellobiose-specific IIA subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.758
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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