STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92543.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (246 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.762
holB
Putative DNA polymerase III delta prime subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.757
glnP1
Putative glutamine ABC transporter permease protein (GlnP); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.668
glnM1
Putative glutamine ABC transporter permease protein GlnM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
       0.645
yabA
DNA replication intiation control protein (DnaH); Involved in initiation control of chromosome replication. Belongs to the YabA family.
 
     0.577
rsmI
Ribribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.550
yaaT
Stage 0 sporulation protein YaaT; Function of homologous gene experimentally demonstrated in an other organism; regulator.
       0.515
metB
Cystathionine gamma-synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.496
glnH2
Putative extracellular major cell-binding factor (Peb1); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
       0.433
SCA91145.1
Putative NAD(P)H-dependent FMN reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.426
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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