STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92558.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (101 aa)    
Predicted Functional Partners:
SCA91851.1
Conserved hypothetical protein containing tetracylcin transcriptional regulator domain; Homologs of previously reported genes of unknown function.
  
     0.703
SCA91455.1
Regulatory protein, TetR; Function of strongly homologous gene; regulator.
  
     0.683
yjbF
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.658
mutR
Putative transcriptional regulator, MutR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.581
SCA90941.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.575
SCA91232.1
Amino acid ABC transporter, glutamine-binding protein/permease protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
     0.571
mdxE
Putative maltose/maltodextrin ABC transporter, sugar-binding protein MalX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.568
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.548
yjbB
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.543
SCA92517.1
Putative omega 1 subunit of RNA polymerase (rnpZA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.530
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.