STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92612.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (168 aa)    
Predicted Functional Partners:
cysK
Cysteine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
  
 0.629
gltB-2
Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.583
mccF
Putative carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.522
rplK
50S ribosomal subunit protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
    0.497
SCA92613.1
Hypothetical protein; No homology to any previously reported sequences.
       0.466
SCA92614.1
Putative protein Type VII secretion system EsaA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
       0.466
SCA91499.1
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.457
ganA
Beta-galactosidase GanA / GH42, similar to LACPI-0219 from L. piscium MKFS47; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
    0.447
fccA1
Fumarate reductase; Function of strongly homologous gene; enzyme.
  
  
 0.432
SCA91771.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.427
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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