STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92662.1Hypothetical protein; No homology to any previously reported sequences. (69 aa)    
Predicted Functional Partners:
metI
DL-methionine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
       0.678
metN
DL-methionine transporter subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.678
SCA92661.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
       0.596
yjbR
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.556
metQ
DL-methionine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the nlpA lipoprotein family.
       0.432
SCA92659.1
Conserved hypothetical protein, transcription regulator domain; Homologs of previously reported genes of unknown function; Belongs to the LysR transcriptional regulatory family.
       0.423
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.