STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92668.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (279 aa)    
Predicted Functional Partners:
SCA92669.1
Putative tRNA editing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.800
SCA91240.1
Putative Glyoxalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.710
SCA90999.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.628
LP2241_10144
Cell surface protein, DUF285-containing; Homologs of previously reported genes of unknown function;Fragment of conserved hypothetical protein containing LXPTG internalin j domain.
  
     0.583
pnuC
Nicotinamide mononucleotide transporter PnuC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
     0.557
SCA92214.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.544
SCA92860.1
Putative Response gene regulator protein AgrA of the LytR/AlgR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.528
thiT
Thiamine transporter ThiT; Function experimentally demonstrated in the studied genus; transporter.
       0.525
SCA92331.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.488
bioY-2
Biotin transporter BioY2; Function experimentally demonstrated in the studied genus; transporter.
       0.441
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.