STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92742.1Conserved hypothetical protein containing Integrase/recombinase, N-terminal domain; Homologs of previously reported genes of unknown function. (172 aa)    
Predicted Functional Partners:
SCA92743.1
Putative Integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family.
     0.991
SCA92744.1
Hypothetical protein; No homology to any previously reported sequences.
       0.768
SCA93053.1
Putative phage integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family.
  
     0.714
SCA91285.1
Putative integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the 'phage' integrase family.
  
     0.691
SCA92118.1
Putative Tyrosine recombinase XerC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.630
SCA92740.1
Conserved hypothetical protein containing Peptidase S24/S26A/S26B/S26C, beta-ribbon domain; Homologs of previously reported genes of unknown function.
 
  
 0.542
SCA92741.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.524
SCA92693.1
Putative Integrase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.468
SCA92748.1
Putative ComF operon protein C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
    0.433
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.