STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arlSPutative two component signal transduction histidine-protein kinase ArlS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (497 aa)    
Predicted Functional Partners:
arlR
Response regulator of two-component system ArlR; Function of strongly homologous gene; regulator.
 
 0.954
phoP
Two-component system regulator; Function of strongly homologous gene; regulator.
 
 
 0.898
walR
Two-component response regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.895
ciaR
Transcriptional regulatory protein CiaR; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.880
kdpE
DNA-binding response regulator in two-component regulatory system with KdpD; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
 0.852
bseR
Putative signal transduction response regulator, C-terminal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
 
 0.804
SCA92056.1
Conserved hypothetical protein (contaning a signal transduction histidine kinase); Homologs of previously reported genes of unknown function.
  
 
 0.701
pdhC
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.653
SCA92013.1
Putative D-ribose-binding periplasmic protein RbsB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 
 0.590
vraR
Two component transcriptional regulator TcsR; Function of homologous gene experimentally demonstrated in an other organism; enzyme;Peptidyl-prolyl cis-trans isomerase (Fragment 1).
 
 
 0.497
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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