STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92819.1ABC transporter, ATPase activity; Function of strongly homologous gene; transporter. (585 aa)    
Predicted Functional Partners:
SCA92818.1
ABC transporter, ATPase activity; Function of strongly homologous gene; transporter.
 
    
0.820
SCA92820.1
Putative transcriptional regulator, AraC type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
  
 0.744
lplA2
Bacterial extracellular solute-binding protein; Function of strongly homologous gene; transporter.
  
     0.629
SCA92776.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
  
0.587
SCA91846.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
  
0.570
yfiB
Permease protein, ABC-type transport system, multidrug-family ATP-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
0.564
SCA92648.1
Putative ABC-type multidrug transport system, ATPase and permease components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
0.559
SCA92795.1
Putative ABC-type multidrug transport system, ATPase and permease components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
0.559
SCA92499.1
Putative maltose and maltodextrin ABC transporter subunit (ATP-binding protein)(malQ, yfiB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
  
0.552
SCA92863.1
Transport/processing ATP-binding protein, ABC-type bacteriocin transporter (mesD, lcnC, comA); Function of strongly homologous gene; transporter.
 
 
  
0.544
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.