STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA92860.1Putative Response gene regulator protein AgrA of the LytR/AlgR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (245 aa)    
Predicted Functional Partners:
SCA92861.1
Signal transduction protein; Homologs of previously reported genes of unknown function.
 
  
 0.961
lcnD
Lactococcin A secretion protein LcnD-like; Function of strongly homologous gene; enzyme.
     
 0.588
SCA92863.1
Transport/processing ATP-binding protein, ABC-type bacteriocin transporter (mesD, lcnC, comA); Function of strongly homologous gene; transporter.
 
   
 0.587
SCA92668.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.528
SCA92864.1
Conserved hypothetical protein containing transcriptional regulator domain; Homologs of previously reported genes of unknown function.
 
     0.481
SCA91746.1
Putative Glycerophosphoryl diester phosphodiesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.469
pnuC
Nicotinamide mononucleotide transporter PnuC; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
     0.458
proA
Gamma-glutamylphosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.438
pflA
Pyruvate formate-lyase-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
       0.437
SCA92879.1
Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase; Homologs of previously reported genes of unknown function.
 
    0.403
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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