STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCA93053.1Putative phage integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin; Belongs to the 'phage' integrase family. (404 aa)    
Predicted Functional Partners:
SCA92742.1
Conserved hypothetical protein containing Integrase/recombinase, N-terminal domain; Homologs of previously reported genes of unknown function.
  
     0.714
SCA91285.1
Putative integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the 'phage' integrase family.
  
     0.632
SCA92743.1
Putative Integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family.
  
     0.584
SCA93052.1
Putative phage excisionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
       0.577
SCA92118.1
Putative Tyrosine recombinase XerC-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
  
     0.564
SCA93039.1
Conserved hypothetical protein containing replication factor; Homologs of previously reported genes of unknown function.
 
    0.460
SCA92748.1
Putative ComF operon protein C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
    0.433
oppA2
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Function of strongly homologous gene; transporter.
  
     0.420
Your Current Organism:
Lactococcus piscium
NCBI taxonomy Id: 1364
Other names: ATCC 700018, CCUG 32207, CCUG 32732, CIP 104371, DSM 6634, JCM 11055, L. piscium, NCFB 2778, NCIMB 13196, strain HRIA 68
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.