STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX56926.1Site-specific DNA recombinase. (215 aa)    
Predicted Functional Partners:
SCX56922.1
Transposase and inactivated derivatives, TnpA family.
 
   
 0.860
SCX57685.1
Site-specific DNA recombinase.
  
     0.773
SCX63492.1
Tn3 transposase DDE domain-containing protein.
 
   
 0.691
SCX56936.1
Transcriptional regulator, XRE family.
 
     0.431
Your Current Organism:
Nitrosospira sp. Nsp1
NCBI taxonomy Id: 136547
Other names: N. sp. Nsp1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.