STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX59347.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SCX59350.1
(2Fe-2S) ferredoxin.
       0.570
SCX49872.1
tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.481
coq7
Ubiquinone biosynthesis monooxygenase Coq7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.
 
     0.424
SCX38499.1
Glutamate--cysteine ligase.
  
     0.417
SCX62625.1
SEC-C motif-containing protein; Belongs to the UPF0225 family.
  
    0.400
Your Current Organism:
Nitrosospira sp. Nsp1
NCBI taxonomy Id: 136547
Other names: N. sp. Nsp1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.