STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCX61265.1Siderophore synthetase component. (594 aa)    
Predicted Functional Partners:
SCX61281.1
Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
 
 
  0.972
SCX61258.1
Siderophore synthetase component.
 
  
0.968
SCX61237.1
Ornithine cyclodeaminase.
 
 
 0.950
SCX61243.1
Siderophore synthetase component.
 
 
 
0.919
SCX61301.1
ParB-like nuclease domain-containing protein.
 
     0.849
SCX61230.1
Cysteine synthase A.
 
    0.824
SCX51410.1
Protein N-acetyltransferase, RimJ/RimL family.
 
 
 0.822
SCX61250.1
Predicted arabinose efflux permease, MFS family.
 
  
 0.822
SCX61275.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
    0.817
SCX61309.1
Iron complex outermembrane recepter protein.
  
  
 0.746
Your Current Organism:
Nitrosospira sp. Nsp1
NCBI taxonomy Id: 136547
Other names: N. sp. Nsp1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.