node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX56520.1 | SCX62116.1 | SAMN05720354_11763 | SAMN05720354_1304 | GTPase, G3E family. | Transcriptional regulator, TraR/DksA family. | 0.539 |
SCX56520.1 | dksA | SAMN05720354_11763 | SAMN05720354_10295 | GTPase, G3E family. | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | 0.541 |
SCX62111.1 | SCX62116.1 | SAMN05720354_1303 | SAMN05720354_1304 | Peroxiredoxin Q/BCP. | Transcriptional regulator, TraR/DksA family. | 0.544 |
SCX62116.1 | SCX56520.1 | SAMN05720354_1304 | SAMN05720354_11763 | Transcriptional regulator, TraR/DksA family. | GTPase, G3E family. | 0.539 |
SCX62116.1 | SCX62111.1 | SAMN05720354_1304 | SAMN05720354_1303 | Transcriptional regulator, TraR/DksA family. | Peroxiredoxin Q/BCP. | 0.544 |
SCX62116.1 | dksA | SAMN05720354_1304 | SAMN05720354_10295 | Transcriptional regulator, TraR/DksA family. | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | 0.558 |
SCX62116.1 | hfq | SAMN05720354_1304 | SAMN05720354_101216 | Transcriptional regulator, TraR/DksA family. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.656 |
SCX62116.1 | rpoA | SAMN05720354_1304 | SAMN05720354_1057 | Transcriptional regulator, TraR/DksA family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.731 |
SCX62116.1 | rpoB | SAMN05720354_1304 | SAMN05720354_10541 | Transcriptional regulator, TraR/DksA family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.782 |
SCX62116.1 | rpoC | SAMN05720354_1304 | SAMN05720354_10540 | Transcriptional regulator, TraR/DksA family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.909 |
SCX62116.1 | rpoD | SAMN05720354_1304 | SAMN05720354_110120 | Transcriptional regulator, TraR/DksA family. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.726 |
SCX62116.1 | rpoH | SAMN05720354_1304 | SAMN05720354_12922 | Transcriptional regulator, TraR/DksA family. | RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. | 0.551 |
SCX62116.1 | rpoZ | SAMN05720354_1304 | SAMN05720354_11161 | Transcriptional regulator, TraR/DksA family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.739 |
dksA | SCX56520.1 | SAMN05720354_10295 | SAMN05720354_11763 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | GTPase, G3E family. | 0.541 |
dksA | SCX62116.1 | SAMN05720354_10295 | SAMN05720354_1304 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | Transcriptional regulator, TraR/DksA family. | 0.558 |
dksA | hfq | SAMN05720354_10295 | SAMN05720354_101216 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family. | 0.656 |
dksA | rpoA | SAMN05720354_10295 | SAMN05720354_1057 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.773 |
dksA | rpoB | SAMN05720354_10295 | SAMN05720354_10541 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.782 |
dksA | rpoC | SAMN05720354_10295 | SAMN05720354_10540 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.909 |
dksA | rpoD | SAMN05720354_10295 | SAMN05720354_110120 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.785 |