STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W6QQP3_PENRFWD repeat protein 23. (396 aa)    
Predicted Functional Partners:
sconC
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.989
rbx1
RING-box protein 1.
    
 0.988
W6Q9W6_PENRF
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.977
W6PY30_PENRF
Cullin, N-terminal; Belongs to the cullin family.
    
 0.974
W6QMQ7_PENRF
Genomic scaffold, ProqFM164S02.
    
 0.929
W6QHA5_PENRF
Cullin, N-terminal; Belongs to the cullin family.
    
 0.883
W6QJX7_PENRF
F-box domain, cyclin-like.
  
  
 
0.874
W6PUH1_PENRF
Genomic scaffold, ProqFM164S01.
    
 0.852
W6Q0Q8_PENRF
Ubiquitin-conjugating enzyme/RWD-like.
    
 0.814
ubl1
Ubiquitin-like protein 1.
    
 0.787
Your Current Organism:
Penicillium roqueforti
NCBI taxonomy Id: 1365484
Other names: P. roqueforti FM164, Penicillium roqueforti FM164
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.