Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V5E4H8_KALBG | V5F0C7_KALBG | V5E4H8 | V5F0C7 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein Sm D2. | 0.999 |
V5E4H8_KALBG | V5GHN1_KALBG | V5E4H8 | V5GHN1 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
V5E4H8_KALBG | V5GLA2_KALBG | V5E4H8 | V5GLA2 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Spliceosomal protein snRNP-U1A/U2B. | 0.948 |
V5E4H8_KALBG | V5GNB9_KALBG | V5E4H8 | V5GNB9 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | Leucine rich repeat. | 0.708 |
V5E4H8_KALBG | V5GR16_KALBG | V5E4H8 | V5GR16 | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | RRM domain-containing protein. | 0.964 |
V5E571_KALBG | V5EDZ4_KALBG | V5E571 | V5EDZ4 | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | Serine/threonine-protein phosphatase. | 0.942 |
V5E571_KALBG | V5ET74_KALBG | V5E571 | V5ET74 | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | Uncharacterized protein. | 0.582 |
V5E571_KALBG | V5GNB9_KALBG | V5E571 | V5GNB9 | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | Leucine rich repeat. | 0.986 |
V5E571_KALBG | V5GW31_KALBG | V5E571 | V5GW31 | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | Protein kinase; Belongs to the protein kinase superfamily. | 0.702 |
V5EDZ4_KALBG | V5E571_KALBG | V5EDZ4 | V5E571 | Serine/threonine-protein phosphatase. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.942 |
V5EDZ4_KALBG | V5ET74_KALBG | V5EDZ4 | V5ET74 | Serine/threonine-protein phosphatase. | Uncharacterized protein. | 0.400 |
V5EDZ4_KALBG | V5GNB9_KALBG | V5EDZ4 | V5GNB9 | Serine/threonine-protein phosphatase. | Leucine rich repeat. | 0.905 |
V5EDZ4_KALBG | V5GW31_KALBG | V5EDZ4 | V5GW31 | Serine/threonine-protein phosphatase. | Protein kinase; Belongs to the protein kinase superfamily. | 0.598 |
V5ET74_KALBG | V5E571_KALBG | V5ET74 | V5E571 | Uncharacterized protein. | Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. | 0.582 |
V5ET74_KALBG | V5EDZ4_KALBG | V5ET74 | V5EDZ4 | Uncharacterized protein. | Serine/threonine-protein phosphatase. | 0.400 |
V5ET74_KALBG | V5GNB9_KALBG | V5ET74 | V5GNB9 | Uncharacterized protein. | Leucine rich repeat. | 0.754 |
V5EUV2_KALBG | V5GNB9_KALBG | V5EUV2 | V5GNB9 | Uncharacterized protein. | Leucine rich repeat. | 0.729 |
V5F0C7_KALBG | V5E4H8_KALBG | V5F0C7 | V5E4H8 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. | 0.999 |
V5F0C7_KALBG | V5GHN1_KALBG | V5F0C7 | V5GHN1 | Small nuclear ribonucleoprotein Sm D2. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
V5F0C7_KALBG | V5GLA2_KALBG | V5F0C7 | V5GLA2 | Small nuclear ribonucleoprotein Sm D2. | Spliceosomal protein snRNP-U1A/U2B. | 0.942 |
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