Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05428963_10186 | SAMN05428963_103354 | Serine acetyltransferase. | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | 0.578 |
SAMN05428963_10186 | SAMN05428963_10424 | Serine acetyltransferase. | O-antigen biosynthesis protein WbqV. | 0.523 |
SAMN05428963_10186 | SAMN05428963_104316 | Serine acetyltransferase. | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.835 |
SAMN05428963_10186 | SAMN05428963_106215 | Serine acetyltransferase. | Uncharacterized protein. | 0.835 |
SAMN05428963_10186 | SAMN05428963_106216 | Serine acetyltransferase. | Polysaccharide export outer membrane protein. | 0.610 |
SAMN05428963_10186 | SAMN05428963_106217 | Serine acetyltransferase. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.888 |
SAMN05428963_10186 | SAMN05428963_11569 | Serine acetyltransferase. | Undecaprenyl-phosphate galactose phosphotransferase. | 0.888 |
SAMN05428963_10186 | SAMN05428963_11586 | Serine acetyltransferase. | Exopolysaccharide production protein ExoF. | 0.610 |
SAMN05428963_103354 | SAMN05428963_10186 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Serine acetyltransferase. | 0.578 |
SAMN05428963_103354 | SAMN05428963_10424 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | O-antigen biosynthesis protein WbqV. | 0.806 |
SAMN05428963_103354 | SAMN05428963_104316 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Uncharacterized protein involved in exopolysaccharide biosynthesis. | 0.965 |
SAMN05428963_103354 | SAMN05428963_106215 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Uncharacterized protein. | 0.954 |
SAMN05428963_103354 | SAMN05428963_106216 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Polysaccharide export outer membrane protein. | 0.760 |
SAMN05428963_103354 | SAMN05428963_106217 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Undecaprenyl-phosphate glucose phosphotransferase. | 0.556 |
SAMN05428963_103354 | SAMN05428963_11045 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.957 |
SAMN05428963_103354 | SAMN05428963_11563 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.957 |
SAMN05428963_103354 | SAMN05428963_11569 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Undecaprenyl-phosphate galactose phosphotransferase. | 0.533 |
SAMN05428963_103354 | SAMN05428963_11586 | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | Exopolysaccharide production protein ExoF. | 0.746 |
SAMN05428963_10424 | SAMN05428963_10186 | O-antigen biosynthesis protein WbqV. | Serine acetyltransferase. | 0.523 |
SAMN05428963_10424 | SAMN05428963_103354 | O-antigen biosynthesis protein WbqV. | Sugar transferase involved in LPS biosynthesis (Colanic, teichoic acid). | 0.806 |
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