STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05428963_107227Disulfide bond formation protein DsbB. (173 aa)    
Predicted Functional Partners:
SAMN05428963_102307
Protein-disulfide isomerase.
 
 
 0.787
SAMN05428963_101323
Protein-disulfide isomerase.
 
 
 0.769
SAMN05428963_107228
Membrane protein YqaA, SNARE-associated domain.
       0.766
SAMN05428963_10947
Protein-disulfide isomerase.
 
 
 0.758
SAMN05428963_106236
Histidine phosphotransferase ChpT.
  
     0.726
SAMN05428963_12514
Protein-disulfide isomerase.
  
 
 0.725
SAMN05428963_11821
Uncharacterized protein.
  
     0.633
SAMN05428963_102161
Global cell cycle regulator GcrA.
  
     0.631
atpF-2
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.623
atpF
ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
   
 0.617
Your Current Organism:
Consotaella salsifontis
NCBI taxonomy Id: 1365950
Other names: Aurantimonas sp. USBA 369, C. salsifontis, CMPUJ U369, Consotaella salsifontis Diaz-Cardenas et al. 2017, KCTC 22549, strain USBA 369
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.