STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05428963_10797Signal transduction histidine kinase. (457 aa)    
Predicted Functional Partners:
SAMN05428963_1048
HAMP domain-containing protein.
 
 
0.980
SAMN05428963_103247
Histidine kinase.
 
0.972
SAMN05428963_10796
Two-component system, OmpR family, response regulator.
 
  0.972
SAMN05428963_101141
Response regulatory domain-containing protein.
   
 0.962
SAMN05428963_110108
PAS domain S-box-containing protein.
  
 0.953
SAMN05428963_104159
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
 
  0.914
SAMN05428963_10944
Two-component system, OmpR family, response regulator.
  
  0.882
SAMN05428963_101387
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
  
  0.879
SAMN05428963_12216
DNA-binding response regulator, OmpR family, contains REC and winged-helix (WHTH) domain.
  
  0.879
SAMN05428963_103248
Two component transcriptional regulator, winged helix family.
  
  0.876
Your Current Organism:
Consotaella salsifontis
NCBI taxonomy Id: 1365950
Other names: Aurantimonas sp. USBA 369, C. salsifontis, CMPUJ U369, Consotaella salsifontis Diaz-Cardenas et al. 2017, KCTC 22549, strain USBA 369
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.