STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERL97772.1PFAM: Heparinase II/III-like protein. (582 aa)    
Predicted Functional Partners:
purH
PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
       0.833
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
       0.833
ERL97775.1
Beta-barrel assembly machine subunit BamF; PFAM: Protein of unknown function (DUF3035).
 
     0.793
ERL97771.1
tRNA/rRNA cytosine-C5-methylase; PFAM: NOL1/NOP2/sun family; NusB family; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
    0.741
ERL98106.1
Hypothetical protein; PFAM: Domain of unknown function (DUF4167).
  
     0.723
ERL97770.1
PFAM: Protein of unknown function (DUF1674).
       0.650
ERL99195.1
PFAM: Mitochondrial inner membrane protein.
  
     0.588
ERL98218.1
PFAM: Outer membrane protein (OmpH-like).
  
     0.588
ERL97776.1
Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
       0.580
ERL97777.1
Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
       0.578
Your Current Organism:
Rhodobacteraceae bacterium HIMB11
NCBI taxonomy Id: 1366046
Other names: R. bacterium HIMB11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.