STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGW88893.1Cation transporter; K06189: corC; magnesium and cobalt transporter. (295 aa)    
Predicted Functional Partners:
AGW88892.1
K03820: lnt; apolipoprotein N-acyltransferase [EC:2.3.1.-].
  
  
 0.893
AGW88894.1
Metalloprotease; Contains unknown N-terminal domain/putative metalloprotease C-terminal domain; K07042: ybeY, yqfG; probable rRNA maturation factor.
  
  
 0.874
AGW88895.1
K06217: phoH, phoL; phosphate starvation-inducible protein PhoH and related proteins.
  
  
 0.718
AGW91303.1
K06173: truA, PUS1; tRNA pseudouridine38-40 synthase [EC:5.4.99.12].
 
     0.536
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
    0.534
miaB
(dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.496
AGW94330.1
Membrane protein.
 
    
 0.479
Your Current Organism:
Ralstonia pickettii DTP0602
NCBI taxonomy Id: 1366050
Other names: R. pickettii DTP0602
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.