STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGW91844.1K00970: pcnB; poly(A) polymerase [EC:2.7.7.19]. (507 aa)    
Predicted Functional Partners:
AGW91845.1
K00950: folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3].
  
  
 0.952
AGW91843.1
Phosphoserine phosphatase.
 
  
 0.884
pnp
Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
 
 0.834
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
  
  
 0.799
AGW92495.1
K03536: rnpA; ribonuclease P protein component [EC:3.1.26.5].
 
 
 0.760
AGW91842.1
K10763: hda; DnaA-homolog protein.
 
 
 
 0.751
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 0.741
miaA
IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; K00791: miaA, TRIT1; tRNA dimethylallyltransferase [EC:2.5.1.75].
 
  
 0.691
AGW91846.1
Deoxynucleoside kinase.
     
 0.680
AGW91668.1
K01525: apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41].
 
  
 0.665
Your Current Organism:
Ralstonia pickettii DTP0602
NCBI taxonomy Id: 1366050
Other names: R. pickettii DTP0602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.