STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_11525Uncharacterized protein. (530 aa)    
Predicted Functional Partners:
AYL99_11708
Uncharacterized protein.
    
 0.802
AYL99_08056
Uncharacterized protein.
    
 0.802
AYL99_09823
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.793
AYL99_09774
DRIM domain-containing protein.
   
  0.610
AYL99_10324
Utp12 domain-containing protein.
    
  0.586
AYL99_06551
Nucleolar protein 58.
    
  0.580
AYL99_04608
WD_REPEATS_REGION domain-containing protein.
    
  0.576
AYL99_09462
Uncharacterized protein.
    
  0.571
AYL99_01595
WD_REPEATS_REGION domain-containing protein.
   
  0.565
AYL99_11300
CBF domain-containing protein.
    
  0.560
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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