STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_0926840S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)    
Predicted Functional Partners:
AYL99_10156
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
AYL99_09269
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.999
AYL99_09392
50S ribosomal protein L31e.
   
 
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
AYL99_07964
Ribosomal protein L24.
  
 0.999
AYL99_07128
Uncharacterized protein.
  
 0.999
AYL99_07260
60S ribosomal protein L8-B.
  
 0.999
AYL99_07592
40S ribosomal protein S19.
   
 0.999
AYL99_07581
40S ribosomal protein S20.
  
 0.999
AYL99_06126
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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