STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_09327Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
AYL99_09823
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.755
AYL99_01152
YTH domain-containing protein.
    
  0.544
AYL99_05658
Uncharacterized protein.
    
  0.542
AYL99_02014
40S ribosomal protein S29.
    
  0.541
AYL99_08965
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.531
AYL99_01772
Ribosomal protein S6.
    
  0.531
AYL99_07842
Ribosomal protein S2.
    
  0.530
AYL99_03652
Ribosomal protein S16.
    
  0.529
AYL99_07049
L51_S25_CI-B8 domain-containing protein.
    
  0.526
AYL99_02398
Ribosomal protein S15.
    
  0.526
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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