STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_09519Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
AYL99_11224
SGNH_hydro domain-containing protein.
 
      0.684
AYL99_06752
Uncharacterized protein; Belongs to the peptidase C19 family.
 
      0.621
AYL99_06598
Transcription initiation protein SPT3.
    
  0.549
AYL99_04035
SCA7 domain-containing protein.
    
 0.529
AYL99_00578
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.514
AYL99_07806
Uncharacterized protein.
    
 0.509
AYL99_04747
TFIID_20kDa domain-containing protein.
    
  0.499
AYL99_08061
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.496
AYL99_11140
Uncharacterized protein.
  
 0.494
AYL99_00533
WD_REPEATS_REGION domain-containing protein.
    
  0.488
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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