STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_09568Uncharacterized protein. (482 aa)    
Predicted Functional Partners:
AYL99_02964
Serine/threonine-protein kinase.
    
 0.760
AYL99_02203
DNA-directed RNA polymerase II subunit C.
   
 0.732
AYL99_06979
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.705
AYL99_08419
Uncharacterized protein.
   
 
 0.699
AYL99_02868
DNA-directed RNA polymerase II subunit F.
    
 0.697
AYL99_07732
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
   
 0.696
AYL99_01684
Uncharacterized protein.
    
 
 0.692
AYL99_09681
Uncharacterized protein.
    
  0.676
AYL99_05809
DNA-directed RNA polymerase II subunit K.
    
  0.676
AYL99_04519
RNA_pol_L_2 domain-containing protein.
    
  0.676
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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