STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_07884ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family. (265 aa)    
Predicted Functional Partners:
AYL99_04961
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 
 0.993
AYL99_04328
TPR_REGION domain-containing protein.
   
 
 0.992
AYL99_03656
EMC1_C domain-containing protein.
    
 
 0.988
AYL99_10491
Uncharacterized protein.
   
 
 0.980
AYL99_00635
DUF2012 domain-containing protein.
   
 
 0.966
AYL99_05676
Uncharacterized protein.
    
 
 0.952
AYL99_05703
Uncharacterized protein.
    
 
 0.949
AYL99_06939
Uncharacterized protein.
    
 
 0.945
AYL99_03704
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.937
AYL99_04030
L-type lectin-like domain-containing protein.
   
 
 0.705
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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