AYL99_07610 protein (Fonsecaea erecta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AYL99_07610

Uncharacterized protein. (780 aa)

Predicted Functional Partners:

AYL99_11646

0.899

AYL99_11555

0.899

AYL99_09165

0.869

AYL99_09160

0.778

AYL99_09391

0.757

AYL99_02026

0.713

AYL99_02027

0.713

ERB1

0.711

AYL99_01457

0.702

AYL99_02239

0.699

Your Current Organism:

Fonsecaea erecta

NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AYL99_01457	AYL99_02026	A0A179A2W9	A0A178ZSM2	CLP1_P domain-containing protein.	Uncharacterized protein.	0.974
AYL99_01457	AYL99_02027	A0A179A2W9	A0A178ZSM6	CLP1_P domain-containing protein.	Uncharacterized protein.	0.968
AYL99_01457	AYL99_07610	A0A179A2W9	A0A178ZFF3	CLP1_P domain-containing protein.	Uncharacterized protein.	0.702
AYL99_01457	AYL99_09160	A0A179A2W9	A0A178ZB89	CLP1_P domain-containing protein.	Ipi1_N domain-containing protein.	0.943
AYL99_01457	AYL99_09165	A0A179A2W9	A0A178ZBK9	CLP1_P domain-containing protein.	ULP_PROTEASE domain-containing protein.	0.987
AYL99_01457	ERB1	A0A179A2W9	A0A178ZHX1	CLP1_P domain-containing protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.833
AYL99_02026	AYL99_01457	A0A178ZSM2	A0A179A2W9	Uncharacterized protein.	CLP1_P domain-containing protein.	0.974
AYL99_02026	AYL99_07610	A0A178ZSM2	A0A178ZFF3	Uncharacterized protein.	Uncharacterized protein.	0.713
AYL99_02026	AYL99_09160	A0A178ZSM2	A0A178ZB89	Uncharacterized protein.	Ipi1_N domain-containing protein.	0.858
AYL99_02026	AYL99_09165	A0A178ZSM2	A0A178ZBK9	Uncharacterized protein.	ULP_PROTEASE domain-containing protein.	0.785
AYL99_02026	ERB1	A0A178ZSM2	A0A178ZHX1	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.791
AYL99_02027	AYL99_01457	A0A178ZSM6	A0A179A2W9	Uncharacterized protein.	CLP1_P domain-containing protein.	0.968
AYL99_02027	AYL99_07610	A0A178ZSM6	A0A178ZFF3	Uncharacterized protein.	Uncharacterized protein.	0.713
AYL99_02027	AYL99_09160	A0A178ZSM6	A0A178ZB89	Uncharacterized protein.	Ipi1_N domain-containing protein.	0.858
AYL99_02027	AYL99_09165	A0A178ZSM6	A0A178ZBK9	Uncharacterized protein.	ULP_PROTEASE domain-containing protein.	0.785
AYL99_02027	ERB1	A0A178ZSM6	A0A178ZHX1	Uncharacterized protein.	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.785
AYL99_02239	AYL99_07610	A0A178ZTB5	A0A178ZFF3	Importin subunit alpha; Belongs to the importin alpha family.	Uncharacterized protein.	0.699
AYL99_02239	AYL99_09165	A0A178ZTB5	A0A178ZBK9	Importin subunit alpha; Belongs to the importin alpha family.	ULP_PROTEASE domain-containing protein.	0.937
AYL99_02239	AYL99_09391	A0A178ZTB5	A0A178Z969	Importin subunit alpha; Belongs to the importin alpha family.	RanBD1 domain-containing protein.	0.995
AYL99_02239	AYL99_11555	A0A178ZTB5	A0A178Z3Z0	Importin subunit alpha; Belongs to the importin alpha family.	Ubiquitin-like domain-containing protein.	0.457