STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_0718540S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (264 aa)    
Predicted Functional Partners:
AYL99_11495
Uncharacterized protein.
  
 
 0.999
AYL99_11143
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 
 0.999
AYL99_10603
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.999
AYL99_10480
60S ribosomal protein L3, variant; Belongs to the universal ribosomal protein uL3 family.
  
 
 0.999
AYL99_10254
S10_plectin domain-containing protein.
   
 0.999
AYL99_10269
60S ribosomal protein L5.
  
 
 0.999
AYL99_10140
Uncharacterized protein.
   
 0.999
AYL99_10156
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
AYL99_10139
Eukaryotic translation initiation factor 5A.
   
 
 0.999
AYL99_09258
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.999
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.