STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AYL99_06256PCI domain-containing protein. (276 aa)    
Predicted Functional Partners:
AYL99_09636
PCI domain-containing protein.
   
 0.999
AYL99_08649
26S proteasome regulatory subunit rpn-8.
   
 0.999
AYL99_07607
PCI domain-containing protein.
   
 0.999
AYL99_06625
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.999
AYL99_05935
PCI domain-containing protein.
   
 0.999
AYL99_03609
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
AYL99_02441
VWFA domain-containing protein.
   
 0.999
AYL99_01236
PCI domain-containing protein.
   
 0.999
AYL99_00993
26S proteasome regulatory subunit rpn11.
   
 0.999
AYL99_01478
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
Your Current Organism:
Fonsecaea erecta
NCBI taxonomy Id: 1367422
Other names: F. erecta, Fonsecaea erecta V. A. Vicente, Najafzadeh, Sun & de Hoog 2013, Fonsecaea sp. RG-2013a
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